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single cell rna seq database  (Human Protein Atlas)

 
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    Human Protein Atlas single cell rna seq database
    Single Cell Rna Seq Database, supplied by Human Protein Atlas, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/rna+seq+databases/data+rna+seq/pm42297981-320-10-13
    Average 86 stars, based on 1 article reviews
    single cell rna seq database - by Bioz Stars, 2026-11
    86/100 stars

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    Related Articles

    RNA Sequencing:

    Article Title: CIRBP Stabilizes Slc7a11 mRNA to Sustain the SLC7A11/GPX4 Antioxidant Axis and Limit Ferroptosis in Doxorubicin-Induced Cardiotoxicity
    Article Snippet: .. Mining of the Human Protein Atlas RNA-seq database revealed that CIRBP transcripts are constitutively expressed at medium-to-high levels in rat myocardium ( A). ..

    other:

    Article Title: Cooperation between CYB5R3 and NOX4 via coenzyme Q mitigates endothelial inflammation
    Article Snippet: The endothelial cell expression levels of these proteins vary across tissues according to the Human Protein Atlas single-cell RNA seq database (RNA single cell type tissue cluster data available from https://www.proteinatlas.org ).

    Article Title: PGLYRP2 drives hepatocyte-intrinsic innate immunity by trapping and clearing hepatitis B virus
    Article Snippet: The RNA-Seq data (GSE148790 infant liver data, GSE183915 adult liver data, GSE61279 liver data) and scRNA-Seq liver data (GSE124395) are accessible in the NCBI’s Gene Expression Omnibus (GEO) database, along with Human Protein Atlas database RNA-Seq normal tissues (PRJEB4337) and Liver Hepatocellular Carcinoma (TCGA, Pan-Cancer Atlas).

    Article Title: Prognostic Significance of MRE11 Overexpression in Colorectal Cancer Patients
    Article Snippet: To validate our findings in this study, we also performed the experiments using RNA-seq databases via The Human Protein Atlas (HPA) ( https://www.proteinatlas.org , accessed on 18 April 2023) to validate our results and we compared them with two individual cohorts from The Cancer Genome Atlas (TCGA-COAD, n = 438 and TCGA-READ, n = 159).

    Expressing:

    Article Title: Liebig’s law of the minimum in the TGF-β/SMAD pathway
    Article Snippet: .. Table A: Observation of imbalanced TGFBR1 and TGFBR2 expression levels in HepG2 and RH30 cell lines across different RNA-Seq databases Cell Line TGFBR1 TGFBR2 TGFBR1-to-TGFBR2 ratio Data Source HepG2 2.94 48.46 0.06 ENCODE HepG2 5.05 58.49 0.09 Cell Model Passports (Sanger) HepG2 15.9 114 0.14 Human Protein Atlas RH30 32.96 9.51 3.47 Cell Model Passports (Sanger) RH30 171.4 40.6 4.22 Human Protein Atlas Note: RNA expression levels are presented in normalized transcripts per million (nTPM) for data from Human Protein Atlas and in fragments per kilobase per million mapped fragments (FPKM) for data from other databases. ..

    RNA Expression:

    Article Title: Liebig’s law of the minimum in the TGF-β/SMAD pathway
    Article Snippet: .. Table A: Observation of imbalanced TGFBR1 and TGFBR2 expression levels in HepG2 and RH30 cell lines across different RNA-Seq databases Cell Line TGFBR1 TGFBR2 TGFBR1-to-TGFBR2 ratio Data Source HepG2 2.94 48.46 0.06 ENCODE HepG2 5.05 58.49 0.09 Cell Model Passports (Sanger) HepG2 15.9 114 0.14 Human Protein Atlas RH30 32.96 9.51 3.47 Cell Model Passports (Sanger) RH30 171.4 40.6 4.22 Human Protein Atlas Note: RNA expression levels are presented in normalized transcripts per million (nTPM) for data from Human Protein Atlas and in fragments per kilobase per million mapped fragments (FPKM) for data from other databases. ..



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